The detailed information of tRNA gene sequence


Sequence ID>WENV170664055
Genome IDJYMV01012463
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 4110
End posion on genome 4185
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
accttgttct
tRNA gene sequence 
GGGCCCTTAGCTCAGTGGTTAGAGCAGCGGACTCATAATCCGTTGGTCCGGGGTTCAAAT
CCCTGAGGGCCCACTA
Downstream region at tRNA end position 
ccaaacttct
Secondary structure (Cloverleaf model)
>WENV170664055	Met	CAT
                   t      ACTA ccaaacttct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     G T C C C     A
      T G A        A      | + | | |     A
    G       C T C G       C G G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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