The detailed information of tRNA gene sequence


Sequence ID>WENV170664322
Genome IDJYMV01015203
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 43872
End posion on genome 43947
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ggagaataat
tRNA gene sequence 
AGGTGAGTAGCTCAATTGGTAGAGCACCGGTCTCCAAAACCGGCGGTTGCGGGTTCAAGT
CCTGCCTCACCTGCAA
Downstream region at tRNA end position 
ctgaaaacga
Secondary structure (Cloverleaf model)
>WENV170664322	Trp	CCA
                   t      GCAA ctgaaaacga
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C          T G
                    T     C G T C C     A
      T A A        A      | | + | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     CGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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