The detailed information of tRNA gene sequence


Sequence ID>WENV170664352
Genome IDJYMV01015545
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 1145
End posion on genome 1070
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
gcaattttgt
tRNA gene sequence 
GGCTCGGTAGCTCAGTCGGTAGAGCAGTGGACTGAAAATCCATGTGTCGCTGGTTCGATT
CCGGCCCGAGCCACTA
Downstream region at tRNA end position 
tgttttactg
Secondary structure (Cloverleaf model)
>WENV170664352	Phe	GAA
                   t      ACTA tgttttactg
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C          T T
                    T     C G G C C     A
      T G A        A      | | + | |     G
    C       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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