The detailed information of tRNA gene sequence


Sequence ID>WENV170664482
Genome IDJYMV01016818
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 2692
End posion on genome 2603
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gatcgcatgt
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTTTAAGGCGCACGCCTGGAAAGCGTGTTGGGGTGTAAGCCCC
TCAGGGGTTCGAATCCCCTCCTCTCTGCCA
Downstream region at tRNA end position 
ctttgcagcc
Secondary structure (Cloverleaf model)
>WENV170664482	Ser	GGA
                   t      GCCA ctttgcagcc
                     G + T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T C C C C     A
      T G A        G      | | | | |     G
    G       G C C G       A G G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TTGGGGTGTAAGCCCCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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