The detailed information of tRNA gene sequence


Sequence ID>WENV170664583
Genome IDJYMV01017906
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 11482
End posion on genome 11406
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaagttttc
tRNA gene sequence 
GGCCCAATAGCTCAGTTGGTTAGAGCATCCGACTCATAATCGGCAGGTCCCCTGTTCAAG
TCAGGGTTGGGCCACCA
Downstream region at tRNA end position 
tataaagcct
Secondary structure (Cloverleaf model)
>WENV170664583	Met	CAT
                   c      ACCA tataaagcct
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     A - T          T G
                    T     G G G A C     A
      T G A        A      | | | | |     A
    T       C T C G       C C C T G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    T   C
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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