The detailed information of tRNA gene sequence


Sequence ID>WENV170664808
Genome IDJYMV01020102
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 3264
End posion on genome 3336
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tactttatat
tRNA gene sequence 
GGCCCCATCGTCTAGCGGTTAGGACGCTGGCCTCTCACGCCGGAAACAGGGGTTCGATTC
CCCTTGGGGCTACtc
Downstream region at tRNA end position 
ttctcaatca
Secondary structure (Cloverleaf model)
>WENV170664808	Glu	CTC
                   t      ACtc ttctcaatca
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     T C C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAC
                    C - G
                    T + G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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