The detailed information of tRNA gene sequence


Sequence ID>WENV170664924
Genome IDJYMV01021053
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 87
End posion on genome 13
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
atactatttt
tRNA gene sequence 
GGCGTCGTACCCAAGTGGTCCAAGGGAGCAGTTTGCAAAACTGTCATTCATCGGTTCGAA
TCCGATCGACGCCTCac
Downstream region at tRNA end position 
tcttgcccgg
Secondary structure (Cloverleaf model)
>WENV170664924	Cys	GCA
                   t      TCac tcttgcccgg
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     T A G C C     A
      T G A        A      | | | | |     G
    G       A C C C       A T C G G     C
    G         | | |                 T T
    T       A G G G
      C C A        A     CATTC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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