The detailed information of tRNA gene sequence


Sequence ID>VRL0100101
Genome IDDQ517337
Search identical group
Phylum/ClassAscoviridae
SpeciesTrichoplusia ni ascovirus 2c
Start position on genome 162822
End posion on genome 162750
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
ttttaatgta
tRNA gene sequence 
GCCTCTTTAGCTCAGTGGTTAGAGCATCGGTCTTATACGCCGGTTGTCGTGAGTTCGATT
CTCACAAGAGGTAatt
Downstream region at tRNA end position 
ctgatttttt
Secondary structure (Cloverleaf model)
>VRL0100101	Ile	TAT
                   a      Aatt ctgatttttt
                     G + T
                     C - G
                     C - G
                     T - A
                     C - G
                     T - A
                     T - A          T T
                    T     C A C T C     A
      T G A        A      | | | | |     G
    G       C T C G       G T G A G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TTGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    T + G
                  C       C
                  T       A
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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