The detailed information of tRNA gene sequence


Sequence ID>WENV170665091
Genome IDJYMV01022460
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 6668
End posion on genome 6592
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaattcagc
tRNA gene sequence 
GGTCCTATAGCTCAGTTGGTTAGAGCACCTGACTCATAATCAGGTGGCCCCAGGTTCGAG
TCCTGGTGGGACCACAA
Downstream region at tRNA end position 
gcctttcttt
Secondary structure (Cloverleaf model)
>WENV170665091	Met	CAT
                   c      ACAA gcctttcttt
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     G G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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