The detailed information of tRNA gene sequence


Sequence ID>WENV170665096
Genome IDJYMV01022487
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 10269
End posion on genome 10194
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
ttatattttt
tRNA gene sequence 
GGGGCCGTAGCTCAGTTGGGAGAGCGCAGCGTTCGCAATGCTGAGGTCGAGGGTTCGACC
CCCTTCGGCTCCACAA
Downstream region at tRNA end position 
aatcacggaa
Secondary structure (Cloverleaf model)
>WENV170665096	Ala	CGC
                   t      ACAA aatcacggaa
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          C C
                    T     T T C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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