The detailed information of tRNA gene sequence


Sequence ID>VRL0100103
Genome IDDQ813662
Search identical group
Phylum/ClassBaculoviridae
SpeciesAnticarsia gemmatalis nucleopolyhedrovirus
Start position on genome 104446
End posion on genome 104529
Amino Acid Thr
Anticodon AGT
Upstream region at tRNA start position 
ttaacatcga
tRNA gene sequence 
GTCTCAGTAGCTTAATGGTTAGAGCGTGGCGCTAGTTATGACAAGGTTGCGAGTTCAAGC
CTCGCCTGAGATaaca
Downstream region at tRNA end position 
attttttgca
Secondary structure (Cloverleaf model)
>VRL0100103	Thr	AGT
                   a      aaca attttttgca
                     G + T
                     T - A
                     C - G
                     T - A
                     C - G
                     A - T
                     G - C          C G
                    T     C G C T C     A
      T A A        A      | | | | |     A
    G       T T C G       G C G A G     C
    G       + | | |                 T T
    T       G A G C
      T A          G     AGGTT
                    T - A
                    G - C
                    G   A
                    C - G
                    G + T
                  C       A
                  T       T *
                    A G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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