The detailed information of tRNA gene sequence


Sequence ID>WENV170665320
Genome IDJYMV01024799
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 4365
End posion on genome 4278
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gattcgcaaa
tRNA gene sequence 
GGAGAGATGGCCGAGTGGCCGAAGGCGCACGCCTGGAAAGTGTGTATACGGCAACGTATC
GAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ccacacccct
Secondary structure (Cloverleaf model)
>WENV170665320	Ser	GGA
                   a      GCCA ccacacccct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      C G A        G     TATACGGCAACGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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