The detailed information of tRNA gene sequence


Sequence ID>WENV170665344
Genome IDJYMV01025072
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 77476
End posion on genome 77386
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccgttctcaa
tRNA gene sequence 
GGAGAGGTGGGTGAGTGGCTGAAACCAGCTCCCTGCTAAGGAGCCATACGCATTGCGCGT
ATCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tttcttttcg
Secondary structure (Cloverleaf model)
>WENV170665344	Ser	GCT
                   a      GCCA tttcttttcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CATACGCATTGCGCGTATC
                    G - C
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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