The detailed information of tRNA gene sequence


Sequence ID>WENV170665515
Genome IDJYMV01027124
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 7313
End posion on genome 7389
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agcgattttt
tRNA gene sequence 
GGCGGAGTAGCTCAGCTGGTTAGAGCAGTGGAATCATAATCCACGTGTCGGGGGTTCGAG
TCCCTCCTCCGCTACAA
Downstream region at tRNA end position 
acaaacccta
Secondary structure (Cloverleaf model)
>WENV170665515	Met	CAT
                   t      ACAA acaaacccta
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    G - C
                    T - A
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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