The detailed information of tRNA gene sequence


Sequence ID>WENV170666011
Genome IDJYMV01032306
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 5031
End posion on genome 4957
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tcggccatgT
tRNA gene sequence 
AGGGGTATAGCTCAGCTGGTAGAGCAACGGTCTCCAAAACCGTAGGTCGCGGGTTCGATC
CCTGCTGCCCCTGTtc
Downstream region at tRNA end position 
ttataatatc
Secondary structure (Cloverleaf model)
>WENV170666011	Trp	CCA
                   T      GTtc ttataatatc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          C T
                    T     C G T C C     A
      C G A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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