The detailed information of tRNA gene sequence


Sequence ID>WENV170666039
Genome IDJYMV01032540
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 2407
End posion on genome 2318
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttattacttt
tRNA gene sequence 
GGAGAGGTGTCTGAGTGGCTTAAGGTGCATGCTTGGAAAGCATGTGTAGGCGCAAGCCTA
CCGGGAGTTCGAATCTCCCCCTCTCCGCCA
Downstream region at tRNA end position 
tttcatgttt
Secondary structure (Cloverleaf model)
>WENV170666039	Ser	GGA
                   t      GCCA tttcatgttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
      T G A        G      | | | | |     G
    G       G T C T       G G G A G     C
    G         + |                   T T
    C       A G G T
      T T A        G     TGTAGGCGCAAGCCTACC
                    C - G
                    A - T
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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