The detailed information of tRNA gene sequence


Sequence ID>WENV170666651
Genome IDJYMV01039374
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 7722
End posion on genome 7796
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
taatattttt
tRNA gene sequence 
GGCGTCGTACCCAAGTGGTCCAAGGGAGCAGTTTGCAAAACTGTCATTCATCGGTTCGAA
TCCGATCGACGCCTCac
Downstream region at tRNA end position 
tcttgcccgg
Secondary structure (Cloverleaf model)
>WENV170666651	Cys	GCA
                   t      TCac tcttgcccgg
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     T A G C C     A
      T G A        A      | | | | |     G
    G       A C C C       A T C G G     C
    G         | | |                 T T
    T       A G G G
      C C A        A     CATTC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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