The detailed information of tRNA gene sequence


Sequence ID>WENV170666827
Genome IDJYMV01040967
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 9578
End posion on genome 9502
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
aattcaacat
tRNA gene sequence 
GCGTCCTTAGCTCAGCTGGATAGAGCAACGCCCTTCTAAGGCGTCGGTCACACGTTCGAA
TCGTGTAGGGCGTACCA
Downstream region at tRNA end position 
tcttttctcc
Secondary structure (Cloverleaf model)
>WENV170666827	Arg	TCT
                   t      ACCA tcttttctcc
                     G + T
                     C - G
                     G - C
                     T + G
                     C - G
                     C - G
                     T - A          T A
                    T     T G T G C     A
      C G A        A      | | | | |     G
    T       C T C G       A C A C G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     CGGTC
                    A - T
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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