The detailed information of tRNA gene sequence


Sequence ID>WENV170667451
Genome IDJYMV01047598
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 11519
End posion on genome 11443
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttcgggcctt
tRNA gene sequence 
GGCGACGTACCCAAGCGGTCTAAGGGAGCGGTCTGCAAAACCGCGATTCATCGGTTCGAA
TCCGATCGTCGCCTCTA
Downstream region at tRNA end position 
tcccgctggt
Secondary structure (Cloverleaf model)
>WENV170667451	Cys	GCA
                   t      TCTA tcccgctggt
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T A G C C     A
      C G A        A      | | | | |     G
    G       A C C C       A T C G G     C
    G         | | |                 T T
    T       A G G G
      C T A        A     GATTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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