The detailed information of tRNA gene sequence


Sequence ID>WENV170667470
Genome IDJYMV01047738
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 22150
End posion on genome 22227
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
agggagggct
tRNA gene sequence 
GGAGCGGTAGTTCAGCCCGGTCAGAACGCCGGCCTGTCAAGCCGGAGGTCGCGGGTTCAA
ATCCCGTCCGCTCCGCCT
Downstream region at tRNA end position 
cccacccatc
Secondary structure (Cloverleaf model)
>WENV170667470	Asp	GTC
                   t      GCCT cccacccatc
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     T G C C C     A
    C C G A        A      + | | | |     A
  C         C T T G       G C G G G     C
  G         | | | |                 T T
  G         G A A C
    T C A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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