The detailed information of tRNA gene sequence


Sequence ID>WENV170667509
Genome IDJYMV01048378
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 15025
End posion on genome 15112
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
taagagattt
tRNA gene sequence 
GGAGAGGTGTCTGAGCGGCTTAAGGTGCATGCTTGGAAAGCATGTGTAGGTGCAAGCCTA
CCGGGAGTTCGAATCTCCCCCTCTCCGCtg
Downstream region at tRNA end position 
acgacaagcc
Secondary structure (Cloverleaf model)
>WENV170667509	Ser	GGA
                   t      GCtg acgacaagcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
      C G A        G      | | | | |     G
    G       G T C T       G G G A G     C
    G         + |                   T T
    C       A G G T
      T T A        G     TGTAGGTGCAAGCCTACC
                    C - G
                    A - T
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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