The detailed information of tRNA gene sequence


Sequence ID>WENV170667603
Genome IDJYMV01049401
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 7836
End posion on genome 7921
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aaaaatgtaa
tRNA gene sequence 
GGAGGGATGGCCGAGTGGTTTAAGGCGGCGGTCTTGAAAACCGTTGTACGAAAGTACCGT
GGGTTCGAATCCTACTCCCTCCGCCA
Downstream region at tRNA end position 
ttttttgaca
Secondary structure (Cloverleaf model)
>WENV170667603	Ser	TGA
                   a      GCCA ttttttgaca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A T C C     A
      T G A        G      | | + | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGTACGAAAGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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