The detailed information of tRNA gene sequence


Sequence ID>WENV170667681
Genome IDJYMV01050337
Search identical group
Phylum/Class[JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean
Species
Start position on genome 5956
End posion on genome 5868
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tcttaccgtg
tRNA gene sequence 
GGAGAGGTGGCAGAGCCTGGCTGAATGCGCCGCACTCGAAATGCGGTATACACCTGGTGT
ATCGGGGGTTCGAATCCCTCCCTCTCCGCag
Downstream region at tRNA end position 
atgttcggta
Secondary structure (Cloverleaf model)
>WENV170667681	Ser	CGA
                   g      GCag atgttcggta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C C G A        G      | + | | |     G
  T         G A C G       G G G G G     C
  G           | | |                 T T
  G         A T G C
    C T G A        G     TATACACCTGGTGTATC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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