The detailed information of tRNA gene sequence


Sequence ID>WENV170668096
Genome IDLADL02001014
Search identical group
Phylum/Class[LADL] rock porewater metagenome; Opalinus Clay rock porewater BRC-3 borehole
Species
Start position on genome 10238
End posion on genome 10162
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nccgcaggtg
tRNA gene sequence 
GGGCCTGTAGCTCAATTGGTTAGAGCAGAGCGCTCATAACGCTTTGGTTGGGGGTTCGAG
TCCCTCCGGGCCTACCA
Downstream region at tRNA end position 
aaccccatct
Secondary structure (Cloverleaf model)
>WENV170668096	Met	CAT
                   g      ACCA aaccccatct
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTT
                    G + T
                    A - T
                    G - C
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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