The detailed information of tRNA gene sequence


Sequence ID>WENV170668559
Genome IDLAHQ01001008
Search identical group
Phylum/Class[LAHQ] activated sludge metagenome; sample C-2; Sludge from acidogenic chamber (second chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 7421
End posion on genome 7498
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcccatatga
tRNA gene sequence 
AGCGGGGTAGGGTAGTCAGGATATCCCGACGGGCTCATAACCCGTAGACCAGTAGTTCAA
ATCTACTCCCCGCTATCA
Downstream region at tRNA end position 
cttttgccat
Secondary structure (Cloverleaf model)
>WENV170668559	Met	CAT
                   a      ATCA cttttgccat
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C A T C     A
    C T G A        A      | | | | |     A
  A         T G G G       A G T A G     C
  G           | | |                 T T
  G         T C C C
    A T A          G     AGACC
                    A - T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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