The detailed information of tRNA gene sequence


Sequence ID>WENV170668563
Genome IDLAHQ01001145
Search identical group
Phylum/Class[LAHQ] activated sludge metagenome; sample C-2; Sludge from acidogenic chamber (second chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 5996
End posion on genome 5908
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
tggtggtcga
tRNA gene sequence 
GCCGCCATAACTCAGATGGTAGAGTGTCTGGCTGTTAATTGAATGAGCAGCAACCAGAAT
GTCACAGGTTCGAGCCCTGTTGGCGGCGCat
Downstream region at tRNA end position 
tcctctgggc
Secondary structure (Cloverleaf model)
>WENV170668563	Asn	GTT
                   a      GCat tcctctgggc
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     A - T          C G
                    T     T G T C C     A
      A G A        A      | | | | |     G
    T       C T C A       A C A G G     C
    G       | | | |                 T T
    G       G A G T
      T A          G     TGAGCAGCAACCAGAATGTC
                    T - A
                    C   A
                    T + G
                    G + T
                    G + T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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