The detailed information of tRNA gene sequence


Sequence ID>WENV170668603
Genome IDLAHQ01004095
Search identical group
Phylum/Class[LAHQ] activated sludge metagenome; sample C-2; Sludge from acidogenic chamber (second chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 467
End posion on genome 380
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
gcatcctttt
tRNA gene sequence 
GCGGGGATTGCCAAGCCAGGTCAAAGGCGCTGGATTCAGGGTCCAGTCACGAAGGTGTTC
GTGGGTTCGAATCCCATTCCCCGCACCT
Downstream region at tRNA end position 
aatcactact
Secondary structure (Cloverleaf model)
>WENV170668603	Leu	CAG
                   t      ACCT aatcactact
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     T A C C C     A
    C C G A        T      + | | | |     G
  A         A C C G       G T G G G     C
  G           | | |                 T T
  G         A G G C
    T C A A        G     TCACGAAGGTGTTC
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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