The detailed information of tRNA gene sequence


Sequence ID>WENV170668608
Genome IDLAHQ01004251
Search identical group
Phylum/Class[LAHQ] activated sludge metagenome; sample C-2; Sludge from acidogenic chamber (second chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 1265
End posion on genome 1189
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
caaaacaaac
tRNA gene sequence 
AGGCCAGTAGCTCTAATGGATAGAGCGCCGGACTCCAAATCCGGATGCTGGGGGTTCAAG
TCCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
gtttttttcc
Secondary structure (Cloverleaf model)
>WENV170668608	Trp	CCA
                   c      GCCA gtttttttcc
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      A A T        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     ATGCT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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