The detailed information of tRNA gene sequence


Sequence ID>WENV170668668
Genome IDLAHQ01010980
Search identical group
Phylum/Class[LAHQ] activated sludge metagenome; sample C-2; Sludge from acidogenic chamber (second chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 431
End posion on genome 355
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gttcacggac
tRNA gene sequence 
AGGCCAGTAGCTCTAATGGCTAGAGCGCCGGACTCCAAATCCGGATGCTGGGGGTTCGAG
TCCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
ctttttcagg
Secondary structure (Cloverleaf model)
>WENV170668668	Trp	CCA
                   c      GCCA ctttttcagg
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      A A T        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     ATGCT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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