The detailed information of tRNA gene sequence


Sequence ID>WENV170668684
Genome IDLAHQ01014471
Search identical group
Phylum/Class[LAHQ] activated sludge metagenome; sample C-2; Sludge from acidogenic chamber (second chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 414
End posion on genome 491
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cctcccgggc
tRNA gene sequence 
GGGACAGTAGGGTAGCCTGGTCCATCCTCGAGCGTTTGGGACGCTTGGACTGCGGTTCAA
ATCCGCGCTGTCCCACCA
Downstream region at tRNA end position 
aatgcctttt
Secondary structure (Cloverleaf model)
>WENV170668684	Pro	TGG
                   c      ACCA aatgcctttt
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C          T A
                    T     G C G C C     A
    C C G A        A      + | | | |     A
  T         T G G G       T G C G G     C
  G           | | +                 T T
  G         T C C T
    T C C A        C     GGAC
                    G + T
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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