The detailed information of tRNA gene sequence


Sequence ID>WENV170668699
Genome IDLAHQ01017048
Search identical group
Phylum/Class[LAHQ] activated sludge metagenome; sample C-2; Sludge from acidogenic chamber (second chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 1585
End posion on genome 1511
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcccaattga
tRNA gene sequence 
AGCGGGGTAGGGTAGTCAGGATATCCCGACGGGCTCATAACCCGTAGATCAGTAGTTCAA
ATCTACTCCCCGCTAttt
Downstream region at tRNA end position 
taaccataaa
Secondary structure (Cloverleaf model)
>WENV170668699	Met	CAT
                   a      Attt taaccataaa
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C A T C     A
    C T G A        A      | | | | |     A
  A         T G G G       A G T A G     C
  G           | | |                 T T
  G         T C C C
    A T A          G     AGATC
                    A - T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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