The detailed information of tRNA gene sequence


Sequence ID>WENV170668705
Genome IDLAHQ01017203
Search identical group
Phylum/Class[LAHQ] activated sludge metagenome; sample C-2; Sludge from acidogenic chamber (second chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 3409
End posion on genome 3332
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ccgaaccggt
tRNA gene sequence 
CGGGATGTAGCGCAGTCCGGTTAGCGCGCTCGGTTCGGGACCGAGAAGTCGGAGGTTCAA
ATCCTCTCATCCCGACCA
Downstream region at tRNA end position 
ttattttttc
Secondary structure (Cloverleaf model)
>WENV170668705	Pro	CGG
                   t      ACCA ttattttttc
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T C T C C     A
    C T G A        A      + | | | |     A
  C         C G C G       G G A G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          G     AAGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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