The detailed information of tRNA gene sequence


Sequence ID>WENV170668718
Genome IDLAHQ01021769
Search identical group
Phylum/Class[LAHQ] activated sludge metagenome; sample C-2; Sludge from acidogenic chamber (second chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 1129
End posion on genome 1053
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
tccgtcgcgt
tRNA gene sequence 
GGGCTCGTGGTCTAGCTGGTTATGACATCGCCTTGACATGGCGGGGATCATGCGTTCGAA
TCGCATCGAGCCCACCA
Downstream region at tRNA end position 
gaaactgccc
Secondary structure (Cloverleaf model)
>WENV170668718	Val	GAC
                   t      ACCA gaaactgccc
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     T A C G C     A
      C G A        G      | | | | |     G
    T       T C T G       A T G C G     C
    G         | | |                 T T
    G       T G A C
      T T A        A     GGATC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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