The detailed information of tRNA gene sequence


Sequence ID>WENV170668720
Genome IDLAHQ01021973
Search identical group
Phylum/Class[LAHQ] activated sludge metagenome; sample C-2; Sludge from acidogenic chamber (second chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 53
End posion on genome 128
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
cgtccgatcc
tRNA gene sequence 
GGGTCGGTAGCTCAGTCGGTAGAGCATCGGACTGAAAATCCGAGTGTCGGCAGTTCAATT
CTGCCCTGACCCACCA
Downstream region at tRNA end position 
tcagtaaagg
Secondary structure (Cloverleaf model)
>WENV170668720	Phe	GAA
                   c      ACCA tcagtaaagg
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G + T
                     G - C          T T
                    T     C C G T C     A
      T G A        A      | | | | |     A
    C       C T C G       G G C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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