The detailed information of tRNA gene sequence


Sequence ID>WENV170668721
Genome IDLAHQ01022548
Search identical group
Phylum/Class[LAHQ] activated sludge metagenome; sample C-2; Sludge from acidogenic chamber (second chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 299
End posion on genome 373
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acagatgagc
tRNA gene sequence 
AGCGAGGTGGGGTAGTCAGGAAATCCCGGCGGGCTCATAACCCGTAGACCGATGGTTCAA
ATCCATCCCTCGCTAtgt
Downstream region at tRNA end position 
tctgttttgc
Secondary structure (Cloverleaf model)
>WENV170668721	Met	CAT
                   c      Atgt tctgttttgc
                     A - T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T A C C     A
    C T G A        G      | | | | |     A
  A         T G G G       G A T G G     C
  G           | | |                 T T
  G         T C C C
    A A A          G     AGACC
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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