The detailed information of tRNA gene sequence


Sequence ID>WENV170668726
Genome IDLAHQ01022829
Search identical group
Phylum/Class[LAHQ] activated sludge metagenome; sample C-2; Sludge from acidogenic chamber (second chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 5504
End posion on genome 5429
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tccgcccggc
tRNA gene sequence 
GGGCCCTTAGCTCAGCGGTTAGAGCAGGGGACTCATAATCCCTTGGTCGTTGGTTCGAAT
CCAACAGGGCCCACCA
Downstream region at tRNA end position 
aaaaaaagac
Secondary structure (Cloverleaf model)
>WENV170668726	Met	CAT
                   c      ACCA aaaaaaagac
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     C A A C C     A
      C G A        A      | | | | |     G
    G       C T C G       G T T G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTC
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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