The detailed information of tRNA gene sequence


Sequence ID>WENV170668742
Genome IDLAHQ01025787
Search identical group
Phylum/Class[LAHQ] activated sludge metagenome; sample C-2; Sludge from acidogenic chamber (second chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 401
End posion on genome 472
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aacacggctt
tRNA gene sequence 
GCCAAGGTGGCGGAGCGGCTACGCGGTTGACTGCAGATCAACTACACTCCGGTTCAAATC
CGGACCTTGGCTtnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170668742	Cys	GCA
                   t      Ttnn nnnnnnnnnn
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     A G G C C     A
        G A        G      | | | | |     A
      C     G G C G       T C C G G     C
      G       | | |                 T T
      G     A C G C
        C T        G     TACAC
                    G - C
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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