The detailed information of tRNA gene sequence


Sequence ID>WENV170668797
Genome IDLAHQ01048262
Search identical group
Phylum/Class[LAHQ] activated sludge metagenome; sample C-2; Sludge from acidogenic chamber (second chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 551
End posion on genome 644
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gggtgattgc
tRNA gene sequence 
GGAGAGATACCGAAGTGGTCGTAACGGGATCGACTCGAAATCGATTTGGGGGCCAAAAGC
TCCCACGGGGGTTCGAATCCCCCTCTCTCCGCCA
Downstream region at tRNA end position 
gtttaaaaat
Secondary structure (Cloverleaf model)
>WENV170668797	Ser	CGA
                   c      GCCA gtttaaaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G G G G G     C
  T           | | |                 T T
  C         A C G G
    G T A          G     TTGGGGGCCAAAAGCTCCCAC
                    A - T
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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