The detailed information of tRNA gene sequence


Sequence ID>WENV170668848
Genome IDLAHQ01066061
Search identical group
Phylum/Class[LAHQ] activated sludge metagenome; sample C-2; Sludge from acidogenic chamber (second chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 295
End posion on genome 225
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
atacattcat
tRNA gene sequence 
GCCGAGATGACCGAGTGGCTAGGTGCGTGGCTGCAGACCACGATACTTGGGTTCAAATCC
CAATCTCGGCCttg
Downstream region at tRNA end position 
taagtcaaat
Secondary structure (Cloverleaf model)
>WENV170668848	Cys	GCA
                   t      Cttg taagtcaaat
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     A A C C C     A
        G A        G      | | | | |     A
      T     G C C A       T T G G G     C
      G       | | |                 T T
      G     A G G T
        C T        G     ATAC
                    C - G
                    G - C
                    T - A
                    G - C
                    G - C
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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