The detailed information of tRNA gene sequence


Sequence ID>WENV170668915
Genome IDLAHQ01119733
Search identical group
Phylum/Class[LAHQ] activated sludge metagenome; sample C-2; Sludge from acidogenic chamber (second chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 83
End posion on genome 159
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ctctaactat
tRNA gene sequence 
GCCTCGGTAGCTCAGTCTGGTGGAGCGCGAGACTTGTAATCTCGTGGTCGCGGGTTCAAT
TCCCGTCCGGGGCTCTA
Downstream region at tRNA end position 
ggcgtagtat
Secondary structure (Cloverleaf model)
>WENV170668915	Thr	TGT
                   t      TCTA ggcgtagtat
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G
                     G - C
                     G - C          T T
                    T     T G C C C     A
      T G A        A      + | | | |     A
    C       C T C G       G C G G G     C
    T       | | | |                 T T
    G       G A G C
      G T G        G     TGGTC
                    C - G
                    G - C
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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