The detailed information of tRNA gene sequence


Sequence ID>WENV170668989
Genome IDLAHR01001254
Search identical group
Phylum/Class[LAHR] activated sludge metagenome; Sample C-3; Sludge from acetogenic chamber (third chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 5075
End posion on genome 4999
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcattcctcT
tRNA gene sequence 
GGGCCTGTAGCTTAGTCCGGTTAGAGCGCTCGGCTCATAACCGAGTGGCCGCCGGTTCAA
ATCCGGCCAGGCCCATgc
Downstream region at tRNA end position 
tggcaactat
Secondary structure (Cloverleaf model)
>WENV170668989	Met	CAT
                   T      ATgc tggcaactat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C G G C C     A
    C T G A        A      | | | | |     A
  C         T T C G       G C C G G     C
  G         + | | |                 T T
  G         G A G C
    T T A          G     TGGCC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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