The detailed information of tRNA gene sequence


Sequence ID>WENV170669004
Genome IDLAHR01001993
Search identical group
Phylum/Class[LAHR] activated sludge metagenome; Sample C-3; Sludge from acetogenic chamber (third chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 125
End posion on genome 200
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tccgcccggc
tRNA gene sequence 
GGGCCCTTAGCTCAGCGGTTAGAGCAGGGGACTCATAATCCCTTGGTCGTTGGTTCGAAT
CCAACAGGGCCCACCA
Downstream region at tRNA end position 
atttactgcc
Secondary structure (Cloverleaf model)
>WENV170669004	Met	CAT
                   c      ACCA atttactgcc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     C A A C C     A
      C G A        A      | | | | |     G
    G       C T C G       G T T G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTC
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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