The detailed information of tRNA gene sequence


Sequence ID>WENV170669065
Genome IDLAHR01004839
Search identical group
Phylum/Class[LAHR] activated sludge metagenome; Sample C-3; Sludge from acetogenic chamber (third chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 861
End posion on genome 787
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
cgctccagtc
tRNA gene sequence 
GCCTCGGTAGCTCAGCCGGTCCAGAGCGATTGACTTGTAATCAATAGGTCGCGTGTTCGA
ATCACGCCCGGGGCTttt
Downstream region at tRNA end position 
ccggttaagg
Secondary structure (Cloverleaf model)
>WENV170669065	Thr	TGT
                   c      Tttt ccggttaagg
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G
                     G - C
                     G - C          T A
                    T     C G C A C     A
    C C G A        A      | | | | |     G
  G         C T C G       G C G T G     C
  G         | | | |                 T T
  T         G A G C
    C C A          G     AGGTC
                    A - T
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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