The detailed information of tRNA gene sequence


Sequence ID>WENV170669068
Genome IDLAHR01005769
Search identical group
Phylum/Class[LAHR] activated sludge metagenome; Sample C-3; Sludge from acetogenic chamber (third chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 71
End posion on genome 156
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gagattctct
tRNA gene sequence 
GTTGAGGTAGCCAAGCCTGGTATGGCGCAGGTTTGCTAAACCTGTGTCCCCCTGGGACTC
GAGGGTTCAAATCCCTCCCTCAGCGCtc
Downstream region at tRNA end position 
caaagaattc
Secondary structure (Cloverleaf model)
>WENV170669068	Ser	GCT
                   t      GCtc caaagaattc
                     G - C
                     T + G
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | | | | |     A
    C       A C C G       G A G G G     C
    T       | | | |                 T T
    G       T G G C
      G T A        G     TGTCCCCCTGGGACTC
                    C - G
                    A - T
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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