The detailed information of tRNA gene sequence


Sequence ID>WENV170669227
Genome IDLAHR01049622
Search identical group
Phylum/Class[LAHR] activated sludge metagenome; Sample C-3; Sludge from acetogenic chamber (third chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 318
End posion on genome 389
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttactactat
tRNA gene sequence 
GCCAAGGTAGCTTAGAGGCGAAGCGGTGGACTGCAGATCCATTACACGTGAGTTCAAATC
TCACCCTTGGCTttt
Downstream region at tRNA end position 
taaaataaat
Secondary structure (Cloverleaf model)
>WENV170669227	Cys	GCA
                   t      Tttt taaaataaat
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C A C T C     A
        G A        A      | | | | |     A
      A     T T C G       G T G A G     C
      G     | | | |                 T T
      G     A A G C
        C G        G     TACAC
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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