The detailed information of tRNA gene sequence


Sequence ID>WENV170669482
Genome IDLAHS01000341
Search identical group
Phylum/Class[LAHS] activated sludge metagenome; sample C-1; Sludge from hydrolytic chamber (first chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 50088
End posion on genome 49997
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agccattctt
tRNA gene sequence 
GGAGAGTTGTCCGAGTGGCCGAAGGAGCACGATTGGAAATCGTGTAGGCGGTTAACACTG
TCTCAAGGGTTCAAATCCCTTACTCTCCGCCA
Downstream region at tRNA end position 
gcactttagg
Secondary structure (Cloverleaf model)
>WENV170669482	Ser	GGA
                   t      GCCA gcactttagg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     T T C C C     A
      T G A        G      | | | | |     A
    G       G C C T       A A G G G     C
    G         | | |                 T T
    C       A G G A
      C G A        G     TAGGCGGTTAACACTGTCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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