The detailed information of tRNA gene sequence


Sequence ID>WENV170669490
Genome IDLAHS01000341
Search identical group
Phylum/Class[LAHS] activated sludge metagenome; sample C-1; Sludge from hydrolytic chamber (first chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 49336
End posion on genome 49263
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gtttttttat
tRNA gene sequence 
AGGGGCATAGTTCAACGGTAGAATAGAGGTCTCCAAAACCTTTGGTGTGGGTTCGATTCC
TACTGCCCCTGCCA
Downstream region at tRNA end position 
attaatttta
Secondary structure (Cloverleaf model)
>WENV170669490	Trp	CCA
                   t      GCCA attaatttta
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          T T
                    T     C A T C C     A
        A A        A      | | + | |     G
      C     C T T G       G T G G G     C
      G     | | | +                 T T
      G     G A A T
        T A        A     TGGT
                    G + T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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