The detailed information of tRNA gene sequence


Sequence ID>WENV170669589
Genome IDLAHS01000610
Search identical group
Phylum/Class[LAHS] activated sludge metagenome; sample C-1; Sludge from hydrolytic chamber (first chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 10849
End posion on genome 10775
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tcacgaacag
tRNA gene sequence 
GGTGCGCTAGTTCAGTTGGTTAGAATGCCTGCCTGTCACGCAGGAGGTCACGAGTTCGAG
TCTCGTGCGCACCGCtt
Downstream region at tRNA end position 
tcttgatccg
Secondary structure (Cloverleaf model)
>WENV170669589	Asp	GTC
                   g      GCtt tcttgatccg
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     G - C
                     C - G          T G
                    T     T G C T C     A
      T G A        A      | | | | |     G
    T       C T T G       A C G A G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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