The detailed information of tRNA gene sequence


Sequence ID>WENV170669592
Genome IDLAHS01000647
Search identical group
Phylum/Class[LAHS] activated sludge metagenome; sample C-1; Sludge from hydrolytic chamber (first chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 23349
End posion on genome 23273
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgaaaataat
tRNA gene sequence 
GGCGGGATAGCTCAGCTGGTTAGAGCGTCGGATTCATAATCCGGAGGTCGTGGGTTCGGG
TCCCACCCCCGCTACAA
Downstream region at tRNA end position 
agactggttg
Secondary structure (Cloverleaf model)
>WENV170669592	Met	CAT
                   t      ACAA agactggttg
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A   C          T G
                    T     C A C C C     G
      C G A        A      | | | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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