The detailed information of tRNA gene sequence


Sequence ID>WENV170669652
Genome IDLAHS01001098
Search identical group
Phylum/Class[LAHS] activated sludge metagenome; sample C-1; Sludge from hydrolytic chamber (first chamber) of Anaerobic Baffled Reactor over
Species
Start position on genome 4079
End posion on genome 4171
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aatatagtat
tRNA gene sequence 
GGAGGTATACCCAAGTCTGGCTGAAGGGATCGGTCTTGAAAACCGACAGGCGGGTAACAC
CGCGCGGGGGTTCGAATCCCTCTACCTCCTCCA
Downstream region at tRNA end position 
gtttttttaa
Secondary structure (Cloverleaf model)
>WENV170669652	Ser	TGA
                   t      TCCA gtttttttaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     C T C C C     A
    C T G A        A      | + | | |     G
  T         A C C C       G G G G G     C
  G           | | |                 T T
  G         A G G G
    C T G A        A     CAGGCGGGTAACACCGCGC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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